Action disabled: register
sna_with_r
Table of Contents
Statistical tool R namespace
SNA with R
R labs at Stanford University
Social Network Analysis with R
Tags > Social Network Analysis in Rbloggers.com
Workshop session
installing packages
install.packages("ergm", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("reshape", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("igraph", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("sna", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("numDeriv", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("MatchIt", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("coin", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("boot", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("Hmisc", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("lattice", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("triads", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("psych", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("nFactors", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("animation", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("NetData", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("NetCluster", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("igraphtosonia", repos = "http://cran.cnr.berkeley.edu/", dependencies = TRUE)
install.packages("network", dependencies = TRUE)
install.packages("statnet", dependencies = TRUE)
install.packages("ggplot2", dependencies = TRUE)
Datasets available in R packages
Data sets in package ‘boot’:
acme Monthly Excess Returns
aids Delay in AIDS Reporting in England and Wales
aircondit Failures of Air-conditioning Equipment
aircondit7 Failures of Air-conditioning Equipment
amis Car Speeding and Warning Signs
aml Remission Times for Acute Myelogenous
Leukaemia
beaver Beaver Body Temperature Data
bigcity Population of U.S. Cities
brambles Spatial Location of Bramble Canes
breslow Smoking Deaths Among Doctors
calcium Calcium Uptake Data
cane Sugar-cane Disease Data
capability Simulated Manufacturing Process Data
catsM Weight Data for Domestic Cats
cav Position of Muscle Caveolae
cd4 CD4 Counts for HIV-Positive Patients
cd4.nested Nested Bootstrap of cd4 data
channing Channing House Data
city Population of U.S. Cities
claridge Genetic Links to Left-handedness
cloth Number of Flaws in Cloth
co.transfer Carbon Monoxide Transfer
coal Dates of Coal Mining Disasters
darwin Darwin's Plant Height Differences
dogs Cardiac Data for Domestic Dogs
downs.bc Incidence of Down's Syndrome in British
Columbia
ducks Behavioral and Plumage Characteristics of
Hybrid Ducks
fir Counts of Balsam-fir Seedlings
frets Head Dimensions in Brothers
grav Acceleration Due to Gravity
gravity Acceleration Due to Gravity
hirose Failure Time of PET Film
islay Jura Quartzite Azimuths on Islay
manaus Average Heights of the Rio Negro river at
Manaus
melanoma Survival from Malignant Melanoma
motor Data from a Simulated Motorcycle Accident
neuro Neurophysiological Point Process Data
nitrofen Toxicity of Nitrofen in Aquatic Systems
nodal Nodal Involvement in Prostate Cancer
nuclear Nuclear Power Station Construction Data
paulsen Neurotransmission in Guinea Pig Brains
poisons Animal Survival Times
polar Pole Positions of New Caledonian Laterites
remission Cancer Remission and Cell Activity
salinity Water Salinity and River Discharge
survival Survival of Rats after Radiation Doses
tau Tau Particle Decay Modes
tuna Tuna Sighting Data
urine Urine Analysis Data
wool Australian Relative Wool Prices
Data sets in package ‘cluster’:
agriculture European Union Agricultural Workforces
animals Attributes of Animals
chorSub Subset of C-horizon of Kola Data
flower Flower Characteristics
plantTraits Plant Species Traits Data
pluton Isotopic Composition Plutonium Batches
ruspini Ruspini Data
votes.repub Votes for Republican Candidate in
Presidential Elections
xclara Bivariate Data Set with 3 Clusters
Data sets in package ‘colorspace’:
USSouthPolygon Polygon for County Map of US South States:
Alabama, Georgia, and South Carolina
Data sets in package ‘datasets’:
AirPassengers Monthly Airline Passenger Numbers 1949-1960
BJsales Sales Data with Leading Indicator
BJsales.lead (BJsales)
Sales Data with Leading Indicator
BOD Biochemical Oxygen Demand
CO2 Carbon Dioxide Uptake in Grass Plants
ChickWeight Weight versus age of chicks on different
diets
DNase Elisa assay of DNase
EuStockMarkets Daily Closing Prices of Major European Stock
Indices, 1991-1998
Formaldehyde Determination of Formaldehyde
HairEyeColor Hair and Eye Color of Statistics Students
Harman23.cor Harman Example 2.3
Harman74.cor Harman Example 7.4
Indometh Pharmacokinetics of Indomethacin
InsectSprays Effectiveness of Insect Sprays
JohnsonJohnson Quarterly Earnings per Johnson & Johnson
Share
LakeHuron Level of Lake Huron 1875-1972
LifeCycleSavings Intercountry Life-Cycle Savings Data
Loblolly Growth of Loblolly pine trees
Nile Flow of the River Nile
Orange Growth of Orange Trees
OrchardSprays Potency of Orchard Sprays
PlantGrowth Results from an Experiment on Plant Growth
Puromycin Reaction Velocity of an Enzymatic Reaction
Seatbelts Road Casualties in Great Britain 1969-84
Theoph Pharmacokinetics of Theophylline
Titanic Survival of passengers on the Titanic
ToothGrowth The Effect of Vitamin C on Tooth Growth in
Guinea Pigs
UCBAdmissions Student Admissions at UC Berkeley
UKDriverDeaths Road Casualties in Great Britain 1969-84
UKgas UK Quarterly Gas Consumption
USAccDeaths Accidental Deaths in the US 1973-1978
USArrests Violent Crime Rates by US State
USJudgeRatings Lawyers' Ratings of State Judges in the US
Superior Court
USPersonalExpenditure
Personal Expenditure Data
UScitiesD Distances Between European Cities and Between
US Cities
VADeaths Death Rates in Virginia (1940)
WWWusage Internet Usage per Minute
WorldPhones The World's Telephones
ability.cov Ability and Intelligence Tests
airmiles Passenger Miles on Commercial US Airlines,
1937-1960
airquality New York Air Quality Measurements
anscombe Anscombe's Quartet of 'Identical' Simple
Linear Regressions
attenu The Joyner-Boore Attenuation Data
attitude The Chatterjee-Price Attitude Data
austres Quarterly Time Series of the Number of
Australian Residents
beaver1 (beavers) Body Temperature Series of Two Beavers
beaver2 (beavers) Body Temperature Series of Two Beavers
cars Speed and Stopping Distances of Cars
chickwts Chicken Weights by Feed Type
co2 Mauna Loa Atmospheric CO2 Concentration
crimtab Student's 3000 Criminals Data
discoveries Yearly Numbers of Important Discoveries
esoph Smoking, Alcohol and (O)esophageal Cancer
euro Conversion Rates of Euro Currencies
euro.cross (euro) Conversion Rates of Euro Currencies
eurodist Distances Between European Cities and Between
US Cities
faithful Old Faithful Geyser Data
fdeaths (UKLungDeaths)
Monthly Deaths from Lung Diseases in the UK
freeny Freeny's Revenue Data
freeny.x (freeny) Freeny's Revenue Data
freeny.y (freeny) Freeny's Revenue Data
infert Infertility after Spontaneous and Induced
Abortion
iris Edgar Anderson's Iris Data
iris3 Edgar Anderson's Iris Data
islands Areas of the World's Major Landmasses
ldeaths (UKLungDeaths)
Monthly Deaths from Lung Diseases in the UK
lh Luteinizing Hormone in Blood Samples
longley Longley's Economic Regression Data
lynx Annual Canadian Lynx trappings 1821-1934
mdeaths (UKLungDeaths)
Monthly Deaths from Lung Diseases in the UK
morley Michelson Speed of Light Data
mtcars Motor Trend Car Road Tests
nhtemp Average Yearly Temperatures in New Haven
nottem Average Monthly Temperatures at Nottingham,
1920-1939
npk Classical N, P, K Factorial Experiment
occupationalStatus Occupational Status of Fathers and their Sons
precip Annual Precipitation in US Cities
presidents Quarterly Approval Ratings of US Presidents
pressure Vapor Pressure of Mercury as a Function of
Temperature
quakes Locations of Earthquakes off Fiji
randu Random Numbers from Congruential Generator
RANDU
rivers Lengths of Major North American Rivers
rock Measurements on Petroleum Rock Samples
sleep Student's Sleep Data
stack.loss (stackloss)
Brownlee's Stack Loss Plant Data
stack.x (stackloss) Brownlee's Stack Loss Plant Data
stackloss Brownlee's Stack Loss Plant Data
state.abb (state) US State Facts and Figures
state.area (state) US State Facts and Figures
state.center (state) US State Facts and Figures
state.division (state)
US State Facts and Figures
state.name (state) US State Facts and Figures
state.region (state) US State Facts and Figures
state.x77 (state) US State Facts and Figures
sunspot.month Monthly Sunspot Data, from 1749 to "Present"
sunspot.year Yearly Sunspot Data, 1700-1988
sunspots Monthly Sunspot Numbers, 1749-1983
swiss Swiss Fertility and Socioeconomic Indicators
(1888) Data
treering Yearly Treering Data, -6000-1979
trees Girth, Height and Volume for Black Cherry
Trees
uspop Populations Recorded by the US Census
volcano Topographic Information on Auckland's Maunga
Whau Volcano
warpbreaks The Number of Breaks in Yarn during Weaving
women Average Heights and Weights for American
Women
Data sets in package ‘dichromat’:
dalton Effects of Daltonism (Red-Green Color
Blindness)
dalton.colors (dalton)
Effects of Daltonism (Red-Green Color
Blindness)
Data sets in package ‘ggplot2’:
diamonds Prices of 50,000 round cut diamonds
economics US economic time series.
economics_long US economic time series.
faithfuld 2d density estimate of Old Faithful data
luv_colours 'colors()' in Luv space.
midwest Midwest demographics.
mpg Fuel economy data from 1999 and 2008 for 38
popular models of car
msleep An updated and expanded version of the
mammals sleep dataset.
presidential Terms of 11 presidents from Eisenhower to
Obama.
seals Vector field of seal movements.
txhousing Housing sales in TX.
Data sets in package ‘lattice’:
barley Yield data from a Minnesota barley trial
environmental Atmospheric environmental conditions in New
York City
ethanol Engine exhaust fumes from burning ethanol
melanoma Melanoma skin cancer incidence
singer Heights of New York Choral Society singers
Data sets in package ‘MASS’:
Aids2 Australian AIDS Survival Data
Animals Brain and Body Weights for 28 Species
Boston Housing Values in Suburbs of Boston
Cars93 Data from 93 Cars on Sale in the USA in 1993
Cushings Diagnostic Tests on Patients with Cushing's
Syndrome
DDT DDT in Kale
GAGurine Level of GAG in Urine of Children
Insurance Numbers of Car Insurance claims
Melanoma Survival from Malignant Melanoma
OME Tests of Auditory Perception in Children with
OME
Pima.te Diabetes in Pima Indian Women
Pima.tr Diabetes in Pima Indian Women
Pima.tr2 Diabetes in Pima Indian Women
Rabbit Blood Pressure in Rabbits
Rubber Accelerated Testing of Tyre Rubber
SP500 Returns of the Standard and Poors 500
Sitka Growth Curves for Sitka Spruce Trees in 1988
Sitka89 Growth Curves for Sitka Spruce Trees in 1989
Skye AFM Compositions of Aphyric Skye Lavas
Traffic Effect of Swedish Speed Limits on Accidents
UScereal Nutritional and Marketing Information on US
Cereals
UScrime The Effect of Punishment Regimes on Crime
Rates
VA Veteran's Administration Lung Cancer Trial
abbey Determinations of Nickel Content
accdeaths Accidental Deaths in the US 1973-1978
anorexia Anorexia Data on Weight Change
bacteria Presence of Bacteria after Drug Treatments
beav1 Body Temperature Series of Beaver 1
beav2 Body Temperature Series of Beaver 2
biopsy Biopsy Data on Breast Cancer Patients
birthwt Risk Factors Associated with Low Infant Birth
Weight
cabbages Data from a cabbage field trial
caith Colours of Eyes and Hair of People in
Caithness
cats Anatomical Data from Domestic Cats
cement Heat Evolved by Setting Cements
chem Copper in Wholemeal Flour
coop Co-operative Trial in Analytical Chemistry
cpus Performance of Computer CPUs
crabs Morphological Measurements on Leptograpsus
Crabs
deaths Monthly Deaths from Lung Diseases in the UK
drivers Deaths of Car Drivers in Great Britain
1969-84
eagles Foraging Ecology of Bald Eagles
epil Seizure Counts for Epileptics
farms Ecological Factors in Farm Management
fgl Measurements of Forensic Glass Fragments
forbes Forbes' Data on Boiling Points in the Alps
galaxies Velocities for 82 Galaxies
gehan Remission Times of Leukaemia Patients
genotype Rat Genotype Data
geyser Old Faithful Geyser Data
gilgais Line Transect of Soil in Gilgai Territory
hills Record Times in Scottish Hill Races
housing Frequency Table from a Copenhagen Housing
Conditions Survey
immer Yields from a Barley Field Trial
leuk Survival Times and White Blood Counts for
Leukaemia Patients
mammals Brain and Body Weights for 62 Species of Land
Mammals
mcycle Data from a Simulated Motorcycle Accident
menarche Age of Menarche in Warsaw
michelson Michelson's Speed of Light Data
minn38 Minnesota High School Graduates of 1938
motors Accelerated Life Testing of Motorettes
muscle Effect of Calcium Chloride on Muscle
Contraction in Rat Hearts
newcomb Newcomb's Measurements of the Passage Time of
Light
nlschools Eighth-Grade Pupils in the Netherlands
npk Classical N, P, K Factorial Experiment
npr1 US Naval Petroleum Reserve No. 1 data
oats Data from an Oats Field Trial
painters The Painter's Data of de Piles
petrol N. L. Prater's Petrol Refinery Data
phones Belgium Phone Calls 1950-1973
quine Absenteeism from School in Rural New South
Wales
road Road Accident Deaths in US States
rotifer Numbers of Rotifers by Fluid Density
ships Ships Damage Data
shoes Shoe wear data of Box, Hunter and Hunter
shrimp Percentage of Shrimp in Shrimp Cocktail
shuttle Space Shuttle Autolander Problem
snails Snail Mortality Data
steam The Saturated Steam Pressure Data
stormer The Stormer Viscometer Data
survey Student Survey Data
synth.te Synthetic Classification Problem
synth.tr Synthetic Classification Problem
topo Spatial Topographic Data
waders Counts of Waders at 15 Sites in South Africa
whiteside House Insulation: Whiteside's Data
wtloss Weight Loss Data from an Obese Patient
Data sets in package ‘Matrix’:
CAex Albers' example Matrix with "Difficult" Eigen
Factorization
KNex Koenker-Ng Example Sparse Model Matrix and
Response Vector
USCounties USCounties Contiguity Matrix
Data sets in package ‘mgcv’:
columb Reduced version of Columbus OH crime data
columb.polys Reduced version of Columbus OH crime data
Data sets in package ‘nlme’:
Alfalfa Split-Plot Experiment on Varieties of Alfalfa
Assay Bioassay on Cell Culture Plate
BodyWeight Rat weight over time for different diets
Cefamandole Pharmacokinetics of Cefamandole
Dialyzer High-Flux Hemodialyzer
Earthquake Earthquake Intensity
Fatigue Cracks caused by metal fatigue
Gasoline Refinery yield of gasoline
Glucose Glucose levels over time
Glucose2 Glucose Levels Following Alcohol Ingestion
Gun Methods for firing naval guns
IGF Radioimmunoassay of IGF-I Protein
Machines Productivity Scores for Machines and Workers
MathAchSchool School demographic data for MathAchieve
MathAchieve Mathematics achievement scores
Meat Tenderness of meat
Milk Protein content of cows' milk
Muscle Contraction of heart muscle sections
Nitrendipene Assay of nitrendipene
Oats Split-plot Experiment on Varieties of Oats
Orthodont Growth curve data on an orthdontic
measurement
Ovary Counts of Ovarian Follicles
Oxboys Heights of Boys in Oxford
Oxide Variability in Semiconductor Manufacturing
PBG Effect of Phenylbiguanide on Blood Pressure
Phenobarb Phenobarbitol Kinetics
Pixel X-ray pixel intensities over time
Quinidine Quinidine Kinetics
Rail Evaluation of Stress in Railway Rails
RatPupWeight The weight of rat pups
Relaxin Assay for Relaxin
Remifentanil Pharmacokinetics of remifentanil
Soybean Growth of soybean plants
Spruce Growth of Spruce Trees
Tetracycline1 Pharmacokinetics of tetracycline
Tetracycline2 Pharmacokinetics of tetracycline
Wafer Modeling of Analog MOS Circuits
Wheat Yields by growing conditions
Wheat2 Wheat Yield Trials
bdf Language scores
ergoStool Ergometrics experiment with stool types
Data sets in package ‘plyr’:
baseball Yearly batting records for all major league
baseball players
ozone Monthly ozone measurements over Central
America.
Data sets in package ‘reshape2’:
french_fries Sensory data from a french fries experiment.
smiths Demo data describing the Smiths.
tips Tipping data
Data sets in package ‘rpart’:
car.test.frame Automobile Data from 'Consumer Reports' 1990
car90 Automobile Data from 'Consumer Reports' 1990
cu.summary Automobile Data from 'Consumer Reports' 1990
kyphosis Data on Children who have had Corrective
Spinal Surgery
solder Soldering of Components on Printed-Circuit
Boards
stagec Stage C Prostate Cancer
Data sets in package ‘sna’:
coleman Coleman's High School Friendship Data
Data sets in package ‘survival’:
aml (leukemia) Acute Myelogenous Leukemia survival data
bladder Bladder Cancer Recurrences
bladder1 (bladder) Bladder Cancer Recurrences
bladder2 (bladder) Bladder Cancer Recurrences
cancer NCCTG Lung Cancer Data
cgd Chronic Granulotomous Disease data
cgd0 (cgd) Chronic Granulotomous Disease data
colon Chemotherapy for Stage B/C colon cancer
flchain Assay of serum free light chain for 7874
subjects.
heart Stanford Heart Transplant data
jasa (heart) Stanford Heart Transplant data
jasa1 (heart) Stanford Heart Transplant data
kidney Kidney catheter data
leukemia Acute Myelogenous Leukemia survival data
logan Data from the 1972-78 GSS data used by Logan
lung NCCTG Lung Cancer Data
mgus Monoclonal gammapothy data
mgus1 (mgus) Monoclonal gammapothy data
mgus2 Monoclonal gammapothy data
nwtco Data from the National Wilm's Tumor Study
ovarian Ovarian Cancer Survival Data
pbc Mayo Clinic Primary Biliary Cirrhosis Data
pbcseq (pbc) Mayo Clinic Primary Biliary Cirrhosis,
sequential data
rats Rat treatment data from Mantel et al
rats2 (rats) Rat data from Gail et al.
stanford2 More Stanford Heart Transplant data
survexp.mn (survexp) Census Data Sets for the Expected Survival
and Person Years Functions
survexp.us (survexp) Census Data Sets for the Expected Survival
and Person Years Functions
survexp.usr (survexp)
Census Data Sets for the Expected Survival
and Person Years Functions
tobin Tobin's Tobit data
transplant Liver transplant waiting list
uspop2 Projected US Population
veteran Veterans' Administration Lung Cancer study
Data sets in package ‘tm’:
acq 50 Exemplary News Articles from the
Reuters-21578 Data Set of Topic acq
crude 20 Exemplary News Articles from the
Reuters-21578 Data Set of Topic crude
sna_with_r.txt · Last modified: 2016/08/24 11:26 by hkimscil